BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034H03LP1|AL429962
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1684 0.0
>3x_Contig1804
Length = 51183
Score = 1684 bits (848), Expect = 0.0
Identities = 853/856 (99%)
Strand = Plus / Plus
Query: 1 gatcctaaggaccaaaggatagtgcagtgaagtgtagcaagacaatgttcttttgaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43223 gatcctaaggaccaaaggatagtgcagtgaagtgtagcaagacaatgttcttttgaggaa 43282
Query: 61 ataattggactgacagttattaactgatatttcagcaacttaaaagaaagagtggcttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43283 ataattggactgacagttattaactgatatttcagcaacttaaaagaaagagtggcttgt 43342
Query: 121 taatgctatttgatatgcaggatcaacaaagccatagtaatagcttccacgataacacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43343 taatgctatttgatatgcaggatcaacaaagccatagtaatagcttccacgataacacaa 43402
Query: 181 gaaatttctgcttatgtgtctttggagctatttatggattgtgaaaggctctattcgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43403 gaaatttctgcttatgtgtctttggagctatttatggattgtgaaaggctctattcgtac 43462
Query: 241 tcgtccacatagcgatgccccattttcaaatatacaatatttccataaaatgacgttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43463 tcgtccacatagcgatgccccattttcaaatatacaatatttccataaaatgacgttcta 43522
Query: 301 gaaatgtggatatatgcagttgaaaagaacagagctttgggtaaatttgtagaaattgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43523 gaaatgtggatatatgcagttgaaaagaacagagctttgggtaaatttgtagaaattgac 43582
Query: 361 gaacgatttacagaatgatagttgctccatcccaaaattatacactcctactaaaggtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43583 gaacgatttacagaatgatagttgctccatcccaaaattatacactcctactaaaggtaa 43642
Query: 421 ctcatagtgggtagataaatcttttgttttcaaaatcggtaagatctagcatggctagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43643 ctcatagtgggtagataaatcttttgttttcaaaatcggtaagatctagcatggctagat 43702
Query: 481 taactctttcgttgactccttctgtgaaagaaacaataccaaagttgtcttctggatgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43703 taactctttcgttgactccttctgtgaaagaaacaataccaaagttgtcttctggatgtt 43762
Query: 541 cttgaacccattgatacctttctttgttccttttcgccaaaatgtatctgattgtyaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 43763 cttgaacccattgatacctttctttgttccttttcgccaaaatgtatctgattgttaaca 43822
Query: 601 aaataacaatattaaggaagaatgaaaccacaatttgaataatccaggatggatagtatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43823 aaataacaatattaaggaagaatgaaaccacaatttgaataatccaggatggatagtatc 43882
Query: 661 ttggggcatcctttggattccagagttgaggagaaatgatgtttgcagcgccatatgcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43883 ttggggcatcctttggattccagagttgaggagaaatgatgtttgcagcgccatatgcca 43942
Query: 721 acataaacattacgttcctgtagagtttcttggtataaccggctgcagatgatgtcgtcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43943 acataaacattacgttcctgtagagtttcttggtataaccggctgcagatgatgtcgtcc 44002
Query: 781 atcccaaagcaataatgtatgtkataccctttgaggagccggctaagatcatacaggcta 840
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 44003 atcccaaagcaataatgtatgtgataccctttgaggagccggctaagatcatacacgcta 44062
Query: 841 acaacgcatatttgtt 856
||||||||||||||||
Sbjct: 44063 acaacgcatatttgtt 44078
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6809
Number of Sequences: 1807
Number of extensions: 6809
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)